Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922234.1_cds_XP_016471062.1_63446
CDS Infomation

[gene=LOC107793254] [db_xref=GeneID:107793254] [protein=geraniol 8-hydroxylase-like] [protein_id=XP_016471062.1] [location=complement(join(6115..6720,7913..8376,8569..8980))] [gbkey=CDS]
Sequence

ATGGAGTACGTGACCATTTTGCTAGGATTGTTGTTCATATGGATTTTGGTGTATGGAGTG
ATGTCACTTGAGAGAAGCAAAAACAAGAAGAGACTTGCACCAGGTCCATTCCCTTTGCCT
ATTATTGGAAATCTTCACTTGCTTGGTGACAAACCCCACATATCACTAGCTAAACTCTCA
AAAATTTATGGTCCAATTATGAATCTCAAATTAGGCCAAGTAAACACAGTGGTTATATCC
TCGTCAGTATTGGCCAGAGAAGTCATGCAAAAGCGAGATTTGGTCTTTGCCAATAGGTCT
GTCGCAGACGCACTACGTGCCCGAAATCACTCTGATTCCTCTGTTGTTTTTCTACCTGTC
AACACTCGCTGGAGAACACTTCGCAAGATTATGAACTCTAACATCTTCTCAGGTAGTAAG
CTTGATGCTAATCAGCATCTCAGAAATAAAAAGATCCAGGAGCTAGTTGATCATTTTCAC
AAGAGTGCCAAAAATGGTGGAACAGTGGATATTGGCAGAGCAGCTTTTAGAACTTCCCTG
AATTTGCTGTCAAACACCATTTTCTCTAAAGATTTGAGTGACCCATTTTCTGATTCTGCT
AAGGAGTTTAAGGACTTGGTGTGGGGCATTATGGTCGAGGCTGGTAAACCCAATTTGGTG
GACTATTTTCCCTTTCTTGTGAAAATTGATCCACAAGGTATAAGGCGGCGCATGACCGAT
CATTTTACTAAGGTTCTTGACCTTATGAGTGGTTTGATTGATGAGCGGCTAAAGGAAAGG
AAACTGAGAAACCATGCAAATGTTGATGTTTTAGATGCCCTTCTCAACATTAGCCCAGAA
GAGCTTGACAGGAATCACATCGAGCATTTGTGTCTGGACTTGTTTGTAGCAGGGACCGAT
ACAACATCAAATACGTTGGAGTGGGCAGTGGCGGAACTACTTAAGAATCCACATACTTTA
GAGAAAGCCCAAGAAGAACTTGCACATGTGATTGGCAGAGGCAAACTAGTAGATGAAACT
GATATTGCACAGCTACCTTACTTGCGATGCATGGTGAAAGAAACATTACGAATACACCCG
GCGCTTCCTTTCTTAATCCCGCGCAAAGTGGAGGAAGATGTTGAGCTTTGTGGCTATATT
GTCCCAAAAGACTCGCAAGTTCTAGTGAATGTGTGGGCAATTGGGCGCGACTCTGGCCTA
TGGGAAAATCCGTTGGACTTTAAGCCAGAGAGGTTTTGGGAGTCGGAAATAGATGTTCGA
GGCCGGGATTTTGAGCTCATACCATTTGGTGCTGGTCGGAGAATTTGCCCTGGATTGCCT
TTGGCTATCAGGATGGTTCCAGTAGCACTAGGTTCATTGCTAAATACGTTTAACTGGAAG
CTCCAAGGTGGAATTGCACCTAAAGATTTGGACATGGAGGAAAAATTTGGTATTACCTTG
GGAAAAGCCCAACCTCTGCTAGCTACTCCAATCCCACTCTAG

Peptide Sequence

PEP ID

XP_016471062.1
PEP Infomation

PREDICTED: geraniol 8-hydroxylase-like [Nicotiana tabacum]
Sequence

MEYVTILLGLLFIWILVYGVMSLERSKNKKRLAPGPFPLPIIGNLHLLGDKPHISLAKLS
KIYGPIMNLKLGQVNTVVISSSVLAREVMQKRDLVFANRSVADALRARNHSDSSVVFLPV
NTRWRTLRKIMNSNIFSGSKLDANQHLRNKKIQELVDHFHKSAKNGGTVDIGRAAFRTSL
NLLSNTIFSKDLSDPFSDSAKEFKDLVWGIMVEAGKPNLVDYFPFLVKIDPQGIRRRMTD
HFTKVLDLMSGLIDERLKERKLRNHANVDVLDALLNISPEELDRNHIEHLCLDLFVAGTD
TTSNTLEWAVAELLKNPHTLEKAQEELAHVIGRGKLVDETDIAQLPYLRCMVKETLRIHP
ALPFLIPRKVEEDVELCGYIVPKDSQVLVNVWAIGRDSGLWENPLDFKPERFWESEIDVR
GRDFELIPFGAGRRICPGLPLAIRMVPVALGSLLNTFNWKLQGGIAPKDLDMEEKFGITL
GKAQPLLATPIPL

Transcript Sequence

Gene sequence data has not been registered.